Protein ZmABI26 | |
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Information | |
TF Name: | ZmABI26 |
Species: | Maize |
TF Family: | ABI3-VP1 |
Gene Name(Synonym): | ABI26 |
Uniprot ID: | K7UER2 |
ZmABI26 is a protein in the ABI3-VP1 family.
Overview of domains present in v5 transcripts | |
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PF02362 | |
Zm00001eb414160_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d024354 | DAPseq | sequence | fimo | position | |
Zm00001d024354 | DAPseq | sequence | fimo | position | |
Zm00001d024354 | ChIPseq | sequence | fimo | position | |
Zm00001d024354 | PChIPseq | sequence | fimo | position |
MEVQMGKAPPCLNPFLMVNPLLPPQHVSPWSSKSVPVFQFGMTNGHGALDLCEESKRARKVVHLEYLFSKVLTPSDVGKL
NRLLIPRQCAEGFFPMISEVKSGGDDIFLNFEDTSTGLVWRFRFCLWNNSKTYVLTKGWSVFIKEKNLKKGDILSFYRDA
SKSIRTNHLFIHIKPHTGTMPLPHHVPSPVFSPSGMVIDDQVHDSLNIGKSHGIAPSWKPLSFGSGELMPSTNPTPQQTT
FPESTSLANSIVMAEKHLRLFGVDIDIPTHRYGDESSDGFIKNIA
MEVQMGKAPPCLNPFLMVNPLLPPQHVSPWSSKSVPVFQFGMTNGHGALDLCEESKRARKVVHLEYLFSKVLTPSDVGKL
NRLLIPRQCAEGFFPMISEVKSGGDDIFLNFEDTSTGLVWRFRFCLWNNSKTYVLTKGWSVFIKEKNLKKGDILSFYRDA
SKSIRTNHLFIHIKPHTGTMPLPHHVPSPVFSPSGMVIDDQVHDSLNIGKSHGIAPSWKPLSFGSGELMPSTNPTPQQTT
FPESTSLANSIVMAEKHLRLFGVDIDIPTHRYGDESSDGFIKNIA
MEVQMGKAPPCLNPFLMVNPLLPPQHVSPWSSKSVPVFQFGMTNGHGALDLCEESKRARKVVHLEYLFSKVLTPSDVGKL
NRLLIPRQCAEGFFPMISEVKSGGDDIFLNFEDTSTGLVWRFRFCLWNNSKTYVLTKGWSVFIKEKNLKKGDILSFYRDA
SKSIRTNHLFIHIKPHTGTMPLPHHVPSPVFSPSGMVIDDQVHDSLNIGKSHGIAPSWKPLSFGSGELMPSTNPTPQQTT
FPESTSLANSIVMAEKHLRLFGVDIDIPTHRYGDESSDGFIKNIA
MEVQMGKAPPCLNPFLMVNPLLPPQHVSPWSSKSVPVFQFGMTNGHGALDLCEESKRARKVVHLEYLFSKVLTPSDVGKL
NRLLIPRQCAEGFFPMISEVKSGGDDIFLNFEDTSTGLVWRFRFCLWNNSKTYVLTKGWSVFIKEKNLKKGDILSFYRDA
SKSIRTNHLFIHIKPHTGTMPLPHHVPSPVFSPSGMVIDDQVHDSLNIGKSHGIAPSWKPLSFGSGELMPSTNPTPQQTT
FPESTSLANSIVMAEKHLRLFGVDIDIPTHRYGDESSDGFIKNIA
MEVQMGKAPPCLNPFLMVNPLLPPQHVSPWSSKSVPVFQFGMTNGHGALDLCEESKRARKVVHLEYLFSKVLTPSDVGKL
NRLLIPRQCAEGFFPMISEVKSGGDDIFLNFEDTSTGLVWRFRFCLWNNSKTYVLTKGWSVFIKEKNLKKGDILSFYRDA
SKSIRTNHLFIHIKPHTGTMPLPHHVPSPVFSPSGMVIDDQVHDSLNIGKSHGIAPSWKPLSFGSGELMPSTNPTPQQTT
FPESTSLANSIVMAEKHLRLFGVDIDIPTHRYGDESSDGFIKNIA
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
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PF02362 |
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Hover here to show all domains |
ATGGAGGTGCAAATGGGGAAGGCCC...
ATGGAGGTGCAAATGGGGAAGGCCCCACCATGTTTGAATCCCTTCCTAATGGTAAACCCTCTTTTGCCCCCTCAGCATGTCTCTCCCTGGTCATCCAAGTCTGTACCAGTTTTTCAATTTGGCATGACCAATGGTCATGGAGCTTTAGATCTATGTGAAGAAAGCAAAAGGGCCAGGAAGGTTGTTCACTTGGAGTACTTGTTCAGCAAGGTTTTAACTCCAAGCGATGTTGGTAAACTAAATCGTCTACTGATACCAAGGCAATGTGCAGAGGGGTTCTTTCCTATGATTTCAGAGGTAAAGAGTGGTGGAGATGACATTTTCCTCAATTTTGAGGACACCTCCACAGGGTTAGTCTGGCGCTTCCGCTTTTGCCTCTGGAATAATAGCAAGACCTATGTCCTGACCAAGGGTTGGTCTGTCTTTATCAAGGAGAAGAATCTCAAGAAAGGTGATATTTTATCCTTTTATCGTGATGCCAGTAAGTCGATAAGAACAAACCACTTATTTATTCATATCAAGCCCCACACCGGTACCATGCCTCTACCACATCATGTGCCAAGTCCGGTCTTCTCTCCATCTGGCATGGTGATTGATGATCAGGTCCACGATAGTCTTAACATCGGTAAAAGCCATGGAATTGCTCCATCTTGGAAGCCTTTGTCCTTTGGATCTGGGGAGTTAATGCCCTCAACTAATCCGACGCCACAACAAACAACATTTCCGGAATCGACGTCACTAGCAAATAGTATTGTAATGGCAGAAAAGCATTTGCGACTATTTGGGGTCGACATTGACATCCCTACTCATCGTTATGGAGATGAGTCTTCCGATGGATTCATCAAGAATATAGCTTGA
MAFSARTISREMEVQMGKAPPCLNPFLMVNPLLPPQHVSPWSSKSVPVFQFGMTNGHGALDLCEESKRARKVVHLEYLFS
KVLTPSDVGKLNRLLIPRQCAEGFFPMISEVKSGGDDIFLNFEDTSTGLVWRFRFCLWNNSKTYVLTKGWSVFIKEKNLK
KGDILSFYRDASKSIRTNHLFIHIKPHTGTMPLPHHVPSPVFSPSGMVIDDQVHDSLNIGKSHGIAPSWKPLSFGSGELM
PSTNPTPQQTTFPESTSLANSIVMAEKHLRLFGVDIDIPTHRYGDESSDGFIKNIA
ATGGCTTTCTCGGCAAGAACGATTT...
ATGGCTTTCTCGGCAAGAACGATTTCAAGGGAGATGGAGGTGCAAATGGGGAAGGCCCCACCATGTTTGAATCCCTTCCTAATGGTAAACCCTCTTTTGCCCCCTCAGCATGTCTCTCCCTGGTCATCCAAGTCTGTACCAGTTTTTCAATTTGGCATGACCAATGGTCATGGAGCTTTAGATCTATGTGAAGAAAGCAAAAGGGCCAGGAAGGTTGTTCACTTGGAGTACTTGTTCAGCAAGGTTTTAACTCCAAGCGATGTTGGTAAACTAAATCGTCTACTGATACCAAGGCAATGTGCAGAGGGGTTCTTTCCTATGATTTCAGAGGTAAAGAGTGGTGGAGATGACATTTTCCTCAATTTTGAGGACACCTCCACAGGGTTAGTCTGGCGCTTCCGCTTTTGCCTCTGGAATAATAGCAAGACCTATGTCCTGACCAAGGGTTGGTCTGTCTTTATCAAGGAGAAGAATCTCAAGAAAGGTGATATTTTATCCTTTTATCGTGATGCCAGTAAGTCGATAAGAACAAACCACTTATTTATTCATATCAAGCCCCACACCGGTACCATGCCTCTACCACATCATGTGCCAAGTCCGGTCTTCTCTCCATCTGGCATGGTGATTGATGATCAGGTCCACGATAGTCTTAACATCGGTAAAAGCCATGGAATTGCTCCATCTTGGAAGCCTTTGTCCTTTGGATCTGGGGAGTTAATGCCCTCAACTAATCCGACGCCACAACAAACAACATTTCCGGAATCGACGTCACTAGCAAATAGTATTGTAATGGCAGAAAAGCATTTGCGACTATTTGGGGTCGACATTGACATCCCTACTCATCGTTATGGAGATGAGTCTTCCGATGGATTCATCAAGAATATAGCTTGA
MEVQMGKAPPCLNPFLMVNPLLPPQHVSPWSSKSVPVFQFGMTNGHGALDLCEESKRARKVVHLEYLFSKVLTPSDVGKL
NRLLIPRQCAEGFFPMISEVKSGGDDIFLNFEDTSTGLVWRFRFCLWNNSKTYVLTKGWSVFIKEKNLKKGDILSFYRDA
SKSIRTNHLFIHIKPHTGTMPLPHHVPSPVFSPSGMVIDDQVHDSLNIGKSHGIAPSWKPLSFGSGELMPSTNPTPQQTT
FPESTSLANSIVMAEKHLRLFGVDIDIPTHRYGDESSDGFIKNIA
ATGGAGGTGCAAATGGGGAAGGCCC...
ATGGAGGTGCAAATGGGGAAGGCCCCACCATGTTTGAATCCCTTCCTAATGGTAAACCCTCTTTTGCCCCCTCAGCATGTCTCTCCCTGGTCATCCAAGTCTGTACCAGTTTTTCAATTTGGCATGACCAATGGTCATGGAGCTTTAGATCTATGTGAAGAAAGCAAAAGGGCCAGGAAGGTTGTTCACTTGGAGTACTTGTTCAGCAAGGTTTTAACTCCAAGCGATGTTGGTAAACTAAATCGTCTACTGATACCAAGGCAATGTGCAGAGGGGTTCTTTCCTATGATTTCAGAGGTAAAGAGTGGTGGAGATGACATTTTCCTCAATTTTGAGGACACCTCCACAGGGTTAGTCTGGCGCTTCCGCTTTTGCCTCTGGAATAATAGCAAGACCTATGTCCTGACCAAGGGTTGGTCTGTCTTTATCAAGGAGAAGAATCTCAAGAAAGGTGATATTTTATCCTTTTATCGTGATGCCAGTAAGTCGATAAGAACAAACCACTTATTTATTCATATCAAGCCCCACACCGGTACCATGCCTCTACCACATCATGTGCCAAGTCCGGTCTTCTCTCCATCTGGCATGGTGATTGATGATCAGGTCCACGATAGTCTTAACATCGGTAAAAGCCATGGAATTGCTCCATCTTGGAAGCCTTTGTCCTTTGGATCTGGGGAGTTAATGCCCTCAACTAATCCGACGCCACAACAAACAACATTTCCGGAATCGACGTCACTAGCAAATAGTATTGTAATGGCAGAAAAGCATTTGCGACTATTTGGGGTCGACATTGACATCCCTACTCATCGTTATGGAGATGAGTCTTCCGATGGATTCATCAAGAATATAGCTTGA
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